Björn Canbäck Bioinformatics

Laslett, D. & Canbäck B. (2008) ARWEN, a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics 24;172-175. PMID: 18033792

Kurland, C.G., Canbäck B. & Berg, O.G. (2007) The origins of modern proteomes. Biochimie 89;1454-1463. PMID: 17949885

Martin, F., Aerts, A., Ahrén, D., Brun, A., Danchin, E.G., Duchaussoy, F., Gibon, J., Kohler, A., Lindquist, E., Pereda, V., Salamov, A., Shapiro, H.J., Wuyts, J., Blaudez, D., Buée, M., Brokstein, P., Canbäck, B., Cohen, D., Courty, P.E., Coutinho, P.M., Delaruelle, C., Detter, J.C., Deveau, A., DiFazio, S., Duplessis, S., Fraissinet-Tachet, L., Lucic, E., Frey-Klett, P., Fourrey, C., Feussner, I., Gay, G., Grimwood, J., Hoegger, P.J., Jain, P., Kilaru, S., Labbé, J., Lin, Y.C., Legué, V., Le Tacon, F., Marmeisse, R., Melayah, D., Montanini, B., Muratet, M., Nehls, U., Niculita-Hirzel, H., Oudot-Le Secq, M.P., Peter, M., Quesneville, H., Rajashekar, B., Reich, M., Rouhier, N., Schmutz, J., Yin, T., Chalot, M., Henrissat, B., Kües, U., Lucas, S., Van de Peer, Y., Podila, G.K., Polle, A., Pukkila, P.J., Richardson, P.M., Rouzé, P., Sanders, I.R., Stajich, J.E., Tunlid, A., Tuskan, G. & Grigoriev, I.V. (2008) The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature 452;88-92. PMID: 18322534

Pommier, T., Canbäck, B., Riemann, L., Boström, K.H., Simu, K., Lundberg, P., Tunlid, A. & Hagström A. (2007) Global patterns of diversity and community structure in marine bacterioplankton. Mol. Ecol. 16;867-880. PMID: 17284217

Le Quere, A., Eriksen, K.A., Rajashekar, B., Schutzendubel, A., Canback, B., Johansson, T. & Tunlid, A. (2006) Screening for rapidly evolving genes in the ectomycorrhizal fungus Paxillus involutus using cDNA microarrays. Mol. Ecol. 15;535-550. PMID: 16448419
Hjerno, K., Alm, R., Canback, B., Matthiesen, R., Trajkovski, K., Bjork, L., Roepstorff, P. & Emanuelsson, C. (2006) Down-regulation of the strawberry Bet v 1-homologous allergen in concert with the flavonoid biosynthesis pathway in colorless strawberry mutant. Proteomics. 6;1574-1587. PMID: 16447153

Jorgensen, H.B., Johansson, T., Canback, B., Hedlund, K. & Tunlid, A. (2005) Selective foraging of fungi by collembolans in soil. Biol. Lett. 1;243-246. PMID: 17148177
Le Quere, A., Eriksen, K.A., Rajashekar, B, Schutzendubel, A, Canback, B., Johansson, T. & Tunlig, A. (2005) An experimental screen for genes that have undergone a period of accelerated evolution J. Biotechnol. 118;S12-S12 Suppl. 1

Le Quere, A. Schutzendubel, A., Rajashekar, B., Canback B., Hedh, J., Erland, S., Johansson, T. & Tunlid, A. (2004) Divergence in gene expression related to variation in host specificity of an ectomycorrhizal fungus. Mol. Ecol. 13;3809-3819. PMID: 15548293
Alsmark, C.M., Frank, A.C., Karlberg, E.O., Legault, B.A., Ardell, D.H., Canback, B., Eriksson, A.S., Naslund, A.K., Handley, S.A., Huvet, M., La Scola, B., Holmberg, M. & Andersson, S.G. (2004) The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae. Proc. Natl. Acad. Sci. U S A. 101;9716-9721. PMID: 15210978
Canback, B., Tamas, I. & Andersson SG. (2004) A Phylogenomic Study of Endosymbiotic Bacteria. Mol. Biol. Evol. 21;1110-1122. PMID: 15014155
Laslett, D. & Canback, B. (2004) ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. Nucleic Acids Res. 32;11-16. PMID: 14704338

Kurland, C.G., Canback, B. & Berg, O.G. (2003) Horizontal gene transfer: a critical view. Proc. Natl. Acad. Sci. U S A. 100;9658-9662. PMID: 12902542
Andersson, S.G., Karlberg, O., Canback, B. & Kurland, C.G. (2003) On the origin of mitochondria: a genomics perspective. Philos. Trans. R. Soc. Lond. B Biol. Sci. 358;165-177; discussion 177-179. PMID: 12594925

Andersson, S.G., Alsmark, C., Canback, B., Davids, W., Frank, C., Karlberg, O., Klasson, L., Antoine-Legault. B., Mira, A. & Tamas, I. (2002) Comparative genomics of microbial pathogens and symbionts. Bioinformatics.18;Suppl 2:S17. PMID: 12594925
Laslett, D., Canback, B. & Andersson, S. (2002) BRUCE: a program for the detection of transfer-messenger RNA genes in nucleotide sequences. Nucleic Acids Res. 30;3449-3453. PMID: 12140330
Tamas, I., Klasson, L., Canback, B., Naslund, A.K., Eriksson, A.S., Wernegreen, J.J., Sandstrom, J.P., Moran, N.A. & Andersson, S.G. (2002) 50 million years of genomic stasis in endosymbiotic bacteria. Science. 296;2376-2379. PMID: 12089438
Canback, B., Andersson, S.G. & Kurland, C.G. (2002) The global phylogeny of glycolytic enzymes. Proc. Natl. Acad. Sci. U S A. 99;6097-6102. PMID: 11983902

Karlberg O, Canback, B., Kurland, C.G. & Andersson, S.G. (2000) The dual origin of the yeast mitochondrial proteome. Yeast. 17;170-187. PMID: 11025528

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